Gamerman920 : .... Well, What ones have you done?
They are not in any order... You can complete them any order that you want.
There side quests are
(Spoiler alert for anyone that has not done these yet.)


Beat the sages(stronger the second time)
Collect the 6 pages and battle ho-oh
Battle the legendary trio of birds.
Battle Super Onix
Get Mew(Secret of Adria)
Research center(deliver the briefcase)

And my favorite
King of the Sea(have to battle and beat magikarps Level 20-99)
I have posted screenshots of each achievement so you can look at those to see them.

Why would I need a net play session to play with my brother?

And I tried to do that, it would not let the 2nd one register.

Is there a way to play 2 player Nintendo 64 games with xpadder, and two retrolink N64 USB controllers?
I tried multiple times, and multiple ways, and the second paddle wont register, only the first one.

It took a couple more hours of Internet searching, but I got Xpadder to work.

I recently bought a retrolink USB nintendo 64 controller, and when I try to use it the controles are all messed up, even when I switch the controls to what they are supposed to be they still dont work.

I read about getting the xpadder, and that doesnt seem to work either.

I liked, and commented on the Christmas game video.

Three way tie between Charizard, Lugia, and Tyranitar.

Arceus is garbage period

I would be the champion... My team being Charizard, Tyranitar, Lugia, Swampert, Garchomp, and Scyther.
Ultimate first four pokemon the last two are just roster fillers.

Mudkip... even though I do not really like mudkip, Swampert is in my top 5 Pokémon.

Kanto, or Hoenn. I would have to say Kanto because Charizard is the best starter.

Charizard for starter, Tyranitar for normal Pokémon, and Lugia for legendary.

Not sure if you knew or not, but I already posted all the legendary locations, in my questions guide over a year ago.

Number 2 on best Screen shots... Not to bad.

I do not remember my whole team, because I have not played in a while but I do have a Shiny Venusuar.

000153 : triune  said he would upload the latest betas in that thread he made talking about the live beta thing or something like that so I would assume its the latest beta

Mother3fan5 : They are in their respective dungeons... they are in the game already, but you can not obtain them until you put it the WMC.

Mother3fan5 : I believe that once you complete those missions you are able to recruit them

Likki : I would guess catching happiny in the safari zone, that or another little pink pokemon

I am making this thread to help people that may have questions or are having trouble with this game.

There seems to be some things in this game that people are unaware of, some being...
The amount of Pokémon you can catch
How to use your moves
When you can evolve
Chances of recruiting Pokémon
and there may be others...

All 386 Pokémon are obtainable in this game.
To use your moves go to your moves in the menu set a move then press A+X to use the move.
You can not evolve until you have completed story mode.

After you complete story mode if you go to gulpin link shop, you can relearn any moves that you could learn from an earlier level. It is free to do. An example is a Charizard can learn heatwave at level 1 so once you get charizard you can get gulpin to teach him that move.

All Pokémon Have set recruiting percentages and they can be changed by 2 things and 2 things only The friend bow, and your level. I have seen people say IQ, rescue rank, and team size affects it. IQ does not affect the recruit rate, Rank does not affect it, and as long as the Pokémon can fit in your party size does not matter either.

How to recruit a Pokémon.
Get the final hit with your starter
Pokémon must be no more than 1 tile away from your starter when defeated.

Here is the level bonus

1- 29                   0.0%

30- 39                   5.0%

40- 49                   7.5%

50- 59                  10.0%

60- 69                  12.5%

70- 79                  15.0%

80- 89                  17.5%

90-100                  24.0%
Friend bow gives 10% increase so maximum increase is 34%.
Here is a link that shows every Pokémon's recruitment %.
http://www.gamefaqs.com/gba/929408-pokemon-mystery-dungeon-red-rescue-team/faqs/46359

Wondermail Codes
Wonder Mail to unlock the blue version exclusive Pokémon

Aipom
4 ? R C W (M) T ? ? 0 7 6 
F M ? Y 2  4  ? 5 + N ? W

Lapras
F ? J ? 6 9 0 ? 4 Q 6 C

C ! ? ? 8 ? 6 6 8 Q ? (F)

Magikarp
X ? ? S ? ? X ? 4 6 8 ?

(F) + ? ? 9 7 5 6 S Y ? ?

Minun

4 ? M 9 F Q X ? 2 8 N 7

H R ? H P 5 ? 0 ! 4 ? W

Porygon2

F ? 5 N - Q F ? ? + 6 !

? H ? ? F ? 6 R 6 9 ? W

Friend area Wonder mail Codes

Boulder Cave

P ? 2 Y J 1 T ? 4 H P C

   K 1 ? + 0 ? 5 6 6 4 ? W

Dragon Cave
H ? 0 8 ? 9 S ? ? Q 6 4

   ? P ? ! 8 4 S 0 + F ? !

Mt. Moonview
0 ? 0 N M 1 S ? ? 0 6 (F)

   N 2 ? Y F 4 + 0 N P ?  W

Sky Blue Plains
2 ? 0 N 1 3 + ? ? 3 6 R

   M T ? R 8 4 2 0 M X ? W

Additional Dungeons

Fantasy Strait

? ? M 1 C J Y ?   4   4 ? P

   H F ? 8 7 J 6 R (...) M ? 1

Marvelous Sea
? ? M H C J (...) ?   4   4 ? P

   C F ? 8 7 J   6   R (...) M ? 1

Oddity Cave
? ? M S C J (...) ?   4   4 ? P

   M F ? 8 7 J   6   R (...) M ? 1

Remains Island
? ? M 4 C J Y ?   4   4 ? P

   C F ? 8 7 J 6 R (...) M ? 1

Wonder mail codes to get statues outside your HQ

Weavile Figure
1 ? N K (M) (M) F ? 4 S S 9

   M F ? +  C   N  N 0 J X ? W

Mime Jr. Figure
F ? C  4  F H T ? 4 4 0 P

   M - ? (M) 2 C N 0 J X ? +
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Wish stone:
If you beat Jirachi on 99F in Wish Cave, and either don't

recruit it (or reject it's offer), if you have this item

on you, it will give you one of these wishes:

"Lots of Money"-Jirachi gives around 10k-18k Poke. Money! 
"Lots of Items"-Jirachi gives random items from Wish Cave.

"Friend Area"-Jirachi will buy you a Friend Area you need.

"More Power"-Jirachi gives Joy Seeds and stat drinks.

"Something Good?"-The next day, Jirachi will raise your
rescue rank to the next level, or give you a non-boss

Pokémon you don't have.

IQ
IQ is raised by feeding your Pokémon gummies. 
Depending on the type of gummy your Pokémon will be affected differently. 
They also fill your belly if in a dungeon. Gummies do not increase belly size.
Gummi matches Pokémon Type: +7  Increases belly 60

Gummi is strong against your Pokémon Type: +4  Increases belly 30

Gummi is neutral against your Pokémon Type: +3  Increases belly 25

Gummi is weak against your Pokémon Type: +2  Increases belly 20

Gummi is ineffective against your Pokémon Type: +1  Increases belly 5

Dual Typed Pokémon gain IQ faster, because they gain IQ from their first, and second type.
 

Raising your IQ can be very beneficial in this game.
You can see about how much IQ your Pokémon has by looking at the stars it has, 
the number of stars they have is how much IQ they have.
1 Star: 0 IQ

2 Stars: 10 IQ

3 Stars: 50 IQ

4 Stars: 100 IQ

5 Stars: 150 IQ

6 Stars: 200 IQ

7 Stars: 300 IQ

8 Stars: 400 IQ

9 Stars: 500 IQ

10 Stars: 600 IQ

11 Stars: 700 IQ

12 Stars "MAX": 990 IQ

When a Pokémon maxes out its IQ It gains the ability "Super Mobile".
This ability allows the Pokémon to walk on all terrain, and be able to dig through walls.

Also IQ is good because some Pokémon only evolve when there IQ is high, 
and some Pokémon only learn certain moves when their IQ is high
Ex. Pichu evolves with min 200 IQ points or 6 stars. 
charizard learns blast burn at level 99 with a min. 333 IQ points
Pichu learns Volt Tackle with 333 IQ and being over level 50.
 

Here is a guide for stat gains based on your Pokémon's level.
It is long so I suggest using Crl + F to find your Pokémon faster
http://www.gamefaqs.com/gba/929408-pokemon-mystery-dungeon-red-rescue-team/faqs/40396

I think that is It for now.

Feel free to ask questions about this game if you are having trouble

1- 29                   0.0%

30- 39                   5.0%

40- 49                   7.5%

50- 59                  10.0%

60- 69                  12.5%

70- 79                  15.0%

80- 89                  17.5%

90-100                  24.0%
Friend bow gives 10% increase so maximum increase is 34%.
Here is a link that shows every Pokémon's recruitment %.
http://www.gamefaqs.com/gba/929408-pokemon-mystery-dungeon-red-rescue-team/faqs/46359

Aipom
4 ? R C W (M) T ? ? 0 7 6 
F M ? Y 2  4  ? 5 + N ? W

4 ? M 9 F Q X ? 2 8 N 7

H R ? H P 5 ? 0 ! 4 ? W

F ? 5 N - Q F ? ? + 6 !

? H ? ? F ? 6 R 6 9 ? W

P ? 2 Y J 1 T ? 4 H P C

   K 1 ? + 0 ? 5 6 6 4 ? W

Dragon Cave
H ? 0 8 ? 9 S ? ? Q 6 4

   ? P ? ! 8 4 S 0 + F ? !

Mt. Moonview
0 ? 0 N M 1 S ? ? 0 6 (F)

   N 2 ? Y F 4 + 0 N P ?  W

Sky Blue Plains
2 ? 0 N 1 3 + ? ? 3 6 R

   M T ? R 8 4 2 0 M X ? W

? ? M 1 C J Y ?   4   4 ? P

   H F ? 8 7 J 6 R (...) M ? 1

Marvelous Sea
? ? M H C J (...) ?   4   4 ? P

   C F ? 8 7 J   6   R (...) M ? 1

Oddity Cave
? ? M S C J (...) ?   4   4 ? P

   M F ? 8 7 J   6   R (...) M ? 1

Remains Island
? ? M 4 C J Y ?   4   4 ? P

   C F ? 8 7 J 6 R (...) M ? 1

Wonder mail codes to get statues outside your HQ

Weavile Figure
1 ? N K (M) (M) F ? 4 S S 9

   M F ? +  C   N  N 0 J X ? W

Mime Jr. Figure
F ? C  4  F H T ? 4 4 0 P

   M - ? (M) 2 C N 0 J X ? +
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Wish stone:
If you beat Jirachi on 99F in Wish Cave, and either don't

recruit it (or reject it's offer), if you have this item

on you, it will give you one of these wishes:

"Lots of Money"-Jirachi gives around 10k-18k Poke. Money! 
"Lots of Items"-Jirachi gives random items from Wish Cave.

"Friend Area"-Jirachi will buy you a Friend Area you need.

"More Power"-Jirachi gives Joy Seeds and stat drinks.

"Something Good?"-The next day, Jirachi will raise your
rescue rank to the next level, or give you a non-boss

Pokémon you don't have.

IQ
IQ is raised by feeding your Pokémon gummies. 
Depending on the type of gummy your Pokémon will be affected differently. 
They also fill your belly if in a dungeon. Gummies do not increase belly size.
Gummi matches Pokémon Type: +7  Increases belly 60

Gummi is strong against your Pokémon Type: +4  Increases belly 30

Gummi is neutral against your Pokémon Type: +3  Increases belly 25

Gummi is weak against your Pokémon Type: +2  Increases belly 20

Gummi is ineffective against your Pokémon Type: +1  Increases belly 5

Dual Typed Pokémon gain IQ faster, because they gain IQ from their first, and second type.
 

Raising your IQ can be very beneficial in this game.
You can see about how much IQ your Pokémon has by looking at the stars it has, 
the number of stars they have is how much IQ they have.
1 Star: 0 IQ

2 Stars: 10 IQ

3 Stars: 50 IQ

4 Stars: 100 IQ

5 Stars: 150 IQ

6 Stars: 200 IQ

7 Stars: 300 IQ

8 Stars: 400 IQ

9 Stars: 500 IQ

10 Stars: 600 IQ

11 Stars: 700 IQ

12 Stars "MAX": 990 IQ

When a Pokémon maxes out its IQ It gains the ability "Super Mobile".
This ability allows the Pokémon to walk on all terrain, and be able to dig through walls.

Also IQ is good because some Pokémon only evolve when there IQ is high, 
and some Pokémon only learn certain moves when their IQ is high
Ex. Pichu evolves with min 200 IQ points or 6 stars. 
charizard learns blast burn at level 99 with a min. 333 IQ points
Pichu learns Volt Tackle with 333 IQ and being over level 50.
 

Here is a guide for stat gains based on your Pokémon's level.
It is long so I suggest using Crl + F to find your Pokémon faster
http://www.gamefaqs.com/gba/929408-pokemon-mystery-dungeon-red-rescue-team/faqs/40396

I think that is It for now.

Feel free to ask questions about this game if you are having trouble